[Glang-users] v.1.8.1

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Kazuharu Arakawa gaou****@sfc*****
2008年 2月 14日 (木) 14:54:20 JST


g.

v.1.8.1のリリースをきりました。

changelogは以下の通り。
===== v.1.8.1    2008.02.14  =====
   *mionor fix for dnawalk, genome_map3, circular_map for Genome  
Projector
   *G::Tools::GMap::generateGMap() can now handle levels greater than 6
   *HTML::Form now required for installation
   *added G::Tools::EMBOSS, with seqret() , and  
G::Tools::Blast::blastall() by Kazuki Oshita
   *added seqret.pl which is a simple script that use seqret() which  
functions identically as EMBOSS seqret command.
   *added blastall.pl which is a simple script that use blastall()  
which functions identically as blastall commandline tool, but with  
DDBJ REST web service (so not formatdb required!).
   *help command now stores documentation in virtual memory, and does  
not build everytime.
   *help shows documentation when there is only one possible entry
   *G::IO now keeps the pointer to the last instance created by new G 
(), which can be accessed by lastInstance G() or lastInstance G::IO 
(). SubOpt::opt_as_gb() now returns this lastInstance when there is  
no argument specified, so you can now do analysis in G-language Shell  
without making a variable for the G instance, as follows:

   G > load ecoli
   G > gcskew
   [ecoli graph comes up]
   G > load bsub
   G > gcskew
   [bsub graph comes up]




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