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專案描述

The Python Macromolecular Library (mmLib) is a
software toolkit and library of routines for the
analysis and manipulation of macromolecular
structural models, implemented in the Python
programming language. It is accessed via a
layered, object-oriented application programming
interface, and provides a range of useful software
components for parsing mmCIF, PDB, and MTZ files,
a library of atomic elements and monomers, an
object-oriented data structure describing
biological macromolecules, and an OpenGL molecular
viewer. The mmLib data model is designed to
provide easy access to the various levels of
detail needed to implement high-level application
programs for macromolecular crystallography, NMR,
modeling, and visualization. This includes
specialized classes for proteins, DNA, amino
acids, and nucleic acids.

System Requirements

System requirement is not defined
Information regarding Project Releases and Project Resources. Note that the information here is a quote from Freecode.com page, and the downloads themselves may not be hosted on OSDN.

2007-05-22 06:44
1.0.0

Support for numpy 1.x and NumericPython support for CIF files.
標籤: Major feature enhancements

2006-03-07 02:36
0.98

The mmLib sub-modules have all been re-factored into a single directory layout, and some modules have been renamed. In all modules, the use of from SomeModule import * has been eliminated, and all imports are now fully specified to reduce name space pollution. The array library used for vectors and matrices has also changed. Numeric Python has been replace by NumPy from the scipy.org suite.
標籤: Major feature enhancements

2005-07-19 01:10
0.9.7

mmLib Core: various bugfixes, performance improvements when using copy.deepcopy() on Structure.py objects, and API enhancements to Structure.py objects. tlsviewer.py: fog now works, and you can save and restore views and orientations.
標籤: Minor feature enhancements

2005-03-09 06:40
0.9.5

Changes include major API additions, bugfixes, and some
new example programs. mmCIF files are now RCSB/ADIT
compliant (they use the same set of mmCIF tags), in the
tlsviewer.py file there were some bugfixes and navigation
improvments , and structure.py includes some API
enhancements.
標籤: Major feature enhancements

2004-11-29 22:46
0.9

This release fixes major bugs and addresses API deficiencies. It has full support for Python copy.deepcopy() on Structure objects. It builds bonds automatically from monomer library definitions, and by inter-atomic distance using covalent radii. The AlphaHelix, BetaSheet, and Site classes have been rewritten. There are performance optimizations. The TLSView application is included for animating TLS rigid-body models.
標籤: Major feature enhancements

Project Resources